fluidigm c1 chip (fluidigm)
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fluidigm c1 chip
Fluidigm C1 Chip, supplied by fluidigm, used in various techniques. Bioz Stars score: 96/100, based on 2081 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/fluidigm+c1+chip/C1/pm40250790-150-12-12
Average 96 stars, based on 2081 article reviews
Fluidigm C1 Chip, supplied by fluidigm, used in various techniques. Bioz Stars score: 96/100, based on 2081 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/fluidigm+c1+chip/C1/pm40250790-150-12-12
Average 96 stars, based on 2081 article reviews
fluidigm c1 chip - by Bioz Stars,
2026-09
96/100 stars
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Staining:Article Title: Kruppel-like factor 2+ CD4 T cells avert microbiota-induced intestinal inflammation. Article Snippet: .. Following tetramer staining, C. albicans specific (I-Ab:2W1S55-68) CD4 cells were flow sorted and loaded onto the other:Article Title: scPrisma infers, filters and enhances topological signals in single-cell data using spectral template matching Article Snippet: We found that the recovered cyclic signal corresponds to an oscillatory pattern related to the experimental Article Title: scPrisma infers, filters and enhances topological signals in single-cell data using spectral template matching Article Snippet: First row in each panel corresponds to cell cycle related marker genes (NUSAP1, KPNA2, CCNB1, TPX2 ), second row corresponds to marker genes associated with an oscillatory pattern related to the experimental Cell Culture:Article Title: Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes Article Snippet: .. For example, the Isolation:Article Title: Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes Article Snippet: .. For example, the Article Title: Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes Article Snippet: 2017 (33) △ Eclipse Ti fluorescence microscope (Nikon) was used Cells were isolated (captured*) and imaged in microwells** (Fluidigm C1 chip) ○ Library preparation was performed using Fluidigm C1 chip ○ 96 cells can be measured in one Fluidigm C1 chip Not performed J. Yuan, et.al., Genome Biol 2018 (34) SCOPESeq △ Eclipse Ti-U microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ 2,352 RNA-Seq expression profiles were measured using one microwell array device and 1,133 of them were linked to imaging data Not performed Z. Liu, et al., Sci. .. Rep. 2020 (35) SCOPEseq2 △ Eclipse Ti2 microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ >9,000 cells were profiled in one microwell array device and > 4,100 of them were linked to imaging data Not performed ○: Enough, △: Not enough * The capture of Single-cell Isolation:Article Title: Multiplex characterization of circulating tumor cells from ductal carcinoma in situ patients suggests early tumor dissemination. Article Snippet: While ducal carcinoma in situ (DCIS) is considered to be pre-invasive, some patients will develop metastatic disease after a long disease-free interval.. The prevailing dogma posits that invasive local recurrence is the source of subsequent metastasis, and thus the goal of DCIS therapy is the prevention of local recurrence.. Recently, this paradigm has been called into question by the observation that some women develop metastatic disease in the absence of local recurrence or even following bilateral mastectomies, suggesting early cancer dissemination in some patients. Lysis:Article Title: Multiplex characterization of circulating tumor cells from ductal carcinoma in situ patients suggests early tumor dissemination. Article Snippet: While ducal carcinoma in situ (DCIS) is considered to be pre-invasive, some patients will develop metastatic disease after a long disease-free interval.. The prevailing dogma posits that invasive local recurrence is the source of subsequent metastasis, and thus the goal of DCIS therapy is the prevention of local recurrence.. Recently, this paradigm has been called into question by the observation that some women develop metastatic disease in the absence of local recurrence or even following bilateral mastectomies, suggesting early cancer dissemination in some patients. Reverse Transcription:Article Title: Multiplex characterization of circulating tumor cells from ductal carcinoma in situ patients suggests early tumor dissemination. Article Snippet: While ducal carcinoma in situ (DCIS) is considered to be pre-invasive, some patients will develop metastatic disease after a long disease-free interval.. The prevailing dogma posits that invasive local recurrence is the source of subsequent metastasis, and thus the goal of DCIS therapy is the prevention of local recurrence.. Recently, this paradigm has been called into question by the observation that some women develop metastatic disease in the absence of local recurrence or even following bilateral mastectomies, suggesting early cancer dissemination in some patients. Microscopy:Article Title: Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes Article Snippet: 2017 (33) △ Eclipse Ti fluorescence microscope (Nikon) was used Cells were isolated (captured*) and imaged in microwells** (Fluidigm C1 chip) ○ Library preparation was performed using Fluidigm C1 chip ○ 96 cells can be measured in one Fluidigm C1 chip Not performed J. Yuan, et.al., Genome Biol 2018 (34) SCOPESeq △ Eclipse Ti-U microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ 2,352 RNA-Seq expression profiles were measured using one microwell array device and 1,133 of them were linked to imaging data Not performed Z. Liu, et al., Sci. .. Rep. 2020 (35) SCOPEseq2 △ Eclipse Ti2 microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ >9,000 cells were profiled in one microwell array device and > 4,100 of them were linked to imaging data Not performed ○: Enough, △: Not enough * The capture of Imaging:Article Title: Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes Article Snippet: 2017 (33) △ Eclipse Ti fluorescence microscope (Nikon) was used Cells were isolated (captured*) and imaged in microwells** (Fluidigm C1 chip) ○ Library preparation was performed using Fluidigm C1 chip ○ 96 cells can be measured in one Fluidigm C1 chip Not performed J. Yuan, et.al., Genome Biol 2018 (34) SCOPESeq △ Eclipse Ti-U microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ 2,352 RNA-Seq expression profiles were measured using one microwell array device and 1,133 of them were linked to imaging data Not performed Z. Liu, et al., Sci. .. Rep. 2020 (35) SCOPEseq2 △ Eclipse Ti2 microscope (Nikon) was used Cells were isolated and imaged in PDMS*** microwells**(chip) ○ Library preparation was performed using chip and beads ○ >9,000 cells were profiled in one microwell array device and > 4,100 of them were linked to imaging data Not performed ○: Enough, △: Not enough * The capture of Live Cell Imaging:Article Title: Spatially Precise In Situ Transcriptomics in Intact Biological Systems Article Snippet: One approach to address this challenge was to modify the Fluidigm C1 chip for compatibility with live-cell imaging in the microwells, followed by direct in-well single-cell RNA sequencing library preparation, directly relating dynamics (in this case, NF-KB dynamics) to single-cell transcriptomic profiles [346]. .. One approach to address this challenge was to modify the RNA Sequencing:Article Title: Spatially Precise In Situ Transcriptomics in Intact Biological Systems Article Snippet: One approach to address this challenge was to modify the Fluidigm C1 chip for compatibility with live-cell imaging in the microwells, followed by direct in-well single-cell RNA sequencing library preparation, directly relating dynamics (in this case, NF-KB dynamics) to single-cell transcriptomic profiles [346]. .. One approach to address this challenge was to modify the Phospho-proteomics:Article Title: Unlocking ovarian cancer heterogeneity: advancing immunotherapy through single-cell transcriptomics Article Snippet: .. Ovarian tumor biopsy , Primary HGSOC tumor biopsy , N=1 92 single cells from tumor tissues , Pre-chemotherapy , 1. Identification of two major cell subsets characterized based on epithelial (proliferative genes, and genes related to oxidative phosphorylation and MYC activity) and stromal (extracellular matrix genes and genes associated with epithelial-to-mesenchymal transition) gene expression patterns. 2. Neither of these groups displayed gene expression patterns associated with chemoresistance based on three independent studies. , Activity Assay:Article Title: Unlocking ovarian cancer heterogeneity: advancing immunotherapy through single-cell transcriptomics Article Snippet: .. Ovarian tumor biopsy , Primary HGSOC tumor biopsy , N=1 92 single cells from tumor tissues , Pre-chemotherapy , 1. Identification of two major cell subsets characterized based on epithelial (proliferative genes, and genes related to oxidative phosphorylation and MYC activity) and stromal (extracellular matrix genes and genes associated with epithelial-to-mesenchymal transition) gene expression patterns. 2. Neither of these groups displayed gene expression patterns associated with chemoresistance based on three independent studies. , Gene Expression:Article Title: Unlocking ovarian cancer heterogeneity: advancing immunotherapy through single-cell transcriptomics Article Snippet: .. Ovarian tumor biopsy , Primary HGSOC tumor biopsy , N=1 92 single cells from tumor tissues , Pre-chemotherapy , 1. Identification of two major cell subsets characterized based on epithelial (proliferative genes, and genes related to oxidative phosphorylation and MYC activity) and stromal (extracellular matrix genes and genes associated with epithelial-to-mesenchymal transition) gene expression patterns. 2. Neither of these groups displayed gene expression patterns associated with chemoresistance based on three independent studies. , |
